Gardnerella vaginalis JCP8108

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Gardnerella

Description

Gardnerella vaginalis JCP8108 is a Gram-positive, rod-shaped bacterium that exhibits anaerobic respiration and is classified as a chemoheterotroph, deriving its energy from organic compounds. This organism is non-motile and does not possess flagella, indicating that it does not have the means for active movement. It thrives optimally at a temperature of 37°C, which is characteristic of mesophilic bacteria, and it has a temperature range conducive to growth within the mesophilic range. G. vaginalis JCP8108 is associated with host environments, indicating a specific ecological niche within the human microbiome, particularly in the vaginal flora. It is classified as free-living, suggesting that it can exist independently within its habitat but is also part of a complex community of microorganisms. The bacterium has a single replicon and one membrane, which aligns with its classification within the broader category of bacteria. The presence of Gardnerella vaginalis in the vaginal microbiota is often linked to various health implications, including bacterial vaginosis. Its ability to thrive in anaerobic conditions and its chemoheterotrophic nature highlight its role in the intricate balance of microbial communities. Understanding these traits provides insight into its ecological interactions and potential impacts on human health. The accession number for this strain is ATJJ00000000.1, which allows for further exploration and study of its genetic and phenotypic characteristics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusGardnerella
SpeciesGardnerella vaginalis
StrainJCP8108

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Gardnerella vaginalis JCP8108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Gardnerella vaginalis JCP8108 G_vaginalisHMPREF1581-1.0_Cont595.2,

Gene Summary

Adenine Count

497092 bp

Thymine Count

482373 bp

Guanine Count

339138 bp

Cytosine Count

344491 bp

Genome Length

1663094 bp

Protein-coding Genes

1502 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate racemaseHMPREF1581_00232Not AvailableNegative282419 - 28320128571.3
putative phosphonate c-p lyase system protein phnkHMPREF1581_00233Not AvailableNegative283255 - 28491960510.3
abc transporter, substrate-binding protein, family 5HMPREF1581_00234Not AvailableNegative284894 - 28664263368.3
abc transporter, permease proteinHMPREF1581_00235Not AvailableNegative286784 - 28779136246.3
putative dipeptide transport system permease protein dppcHMPREF1581_00236Not AvailableNegative287788 - 28867531678.2
hypothetical proteinHMPREF1581_00237Not AvailableNegative288854 - 2889734557.61
hypothetical proteinHMPREF1581_00238Not AvailablePositive289142 - 28941710879.8
putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain proteinHMPREF1581_00239Not AvailablePositive289395 - 28965810065.0
anticodon-binding domain proteinHMPREF1581_00240Not AvailableNegative289737 - 29072135297.6
transketolase, pyridine binding domain proteinHMPREF1581_00241Not AvailablePositive290722 - 29154330033.6

Displaying genes 251 – 260 of 1562 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.