Gardnerella vaginalis JCP8108

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Gardnerella

Description

Gardnerella vaginalis JCP8108 is a Gram-positive, rod-shaped bacterium that exhibits anaerobic respiration and is classified as a chemoheterotroph, deriving its energy from organic compounds. This organism is non-motile and does not possess flagella, indicating that it does not have the means for active movement. It thrives optimally at a temperature of 37°C, which is characteristic of mesophilic bacteria, and it has a temperature range conducive to growth within the mesophilic range. G. vaginalis JCP8108 is associated with host environments, indicating a specific ecological niche within the human microbiome, particularly in the vaginal flora. It is classified as free-living, suggesting that it can exist independently within its habitat but is also part of a complex community of microorganisms. The bacterium has a single replicon and one membrane, which aligns with its classification within the broader category of bacteria. The presence of Gardnerella vaginalis in the vaginal microbiota is often linked to various health implications, including bacterial vaginosis. Its ability to thrive in anaerobic conditions and its chemoheterotrophic nature highlight its role in the intricate balance of microbial communities. Understanding these traits provides insight into its ecological interactions and potential impacts on human health. The accession number for this strain is ATJJ00000000.1, which allows for further exploration and study of its genetic and phenotypic characteristics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusGardnerella
SpeciesGardnerella vaginalis
StrainJCP8108

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Gardnerella vaginalis JCP8108
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Gardnerella vaginalis JCP8108 G_vaginalisHMPREF1581-1.0_Cont595.2,

Gene Summary

Adenine Count

497092 bp

Thymine Count

482373 bp

Guanine Count

339138 bp

Cytosine Count

344491 bp

Genome Length

1663094 bp

Protein-coding Genes

1502 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anchored repeat abc transporter, substrate-binding proteinHMPREF1581_01471Not AvailableNegative1566966 - 156858559340.6
hypothetical proteinHMPREF1581_01472Not AvailableNegative1568586 - 15687114642.26
hypothetical proteinHMPREF1581_01473Not AvailablePositive1568736 - 15688795567.78
putative ribonuclease iiiHMPREF1581_01474Not AvailablePositive1568936 - 156958123653.6
trna (guanine-n(1)-)-methyltransferaseHMPREF1581_01475Not AvailableNegative1569656 - 157048030566.0
16s rrna processing protein rimmHMPREF1581_01476Not AvailableNegative1570513 - 157110922147.4
hypothetical proteinHMPREF1581_01477Not AvailableNegative1571106 - 15713398706.58
ribosomal protein s16HMPREF1581_01478Not AvailableNegative1571342 - 157190820558.4
aspartate transaminase domain proteinHMPREF1581_01479Not AvailableNegative1572111 - 157267620045.7
putative 3-deoxy-7-phosphoheptulonate synthaseHMPREF1581_01480Not AvailablePositive1572919 - 157371928234.3

Displaying genes 1471 – 1480 of 1562 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.