Bifidobacterium thermophilum RBL67

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium thermophilum RBL67 is a Gram-positive, rod-shaped bacterium classified as an anaerobe, meaning it thrives in environments devoid of oxygen. This species is primarily found in the feces of infants, indicating its role in the early stages of human gut colonization. Bifidobacterium thermophilum RBL67 exhibits a cell arrangement characterized by pairs, which is typical of many species within the Bifidobacterium genus. Additionally, this bacterium possesses flagella, which may contribute to its motility, although the ecological significance of this feature in the gut environment remains to be fully understood. Bifidobacterium thermophilum RBL67 has a single replicon and is associated with both Homo sapiens (humans) and Sus scrofa (domestic pigs), suggesting its adaptability to different hosts. The presence of Bifidobacterium species in infant feces is significant for gut health, as these bacteria are known to contribute to the development of a healthy microbiome during early life. They may play a crucial role in digestion and the overall immune response in infants. The ecological insight drawn from the habitat of Bifidobacterium thermophilum RBL67 highlights its importance in establishing microbial communities that can influence gut health and development in both humans and pigs. Understanding the role of such organisms could inform strategies for promoting beneficial gut microbiota in early life.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium thermophilum
StrainRBL67

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium thermophilum RBL67
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbaby faeces; baby feces; infant faeces; infant feces
Biotic relationshipNot Available
Host(s)Homo sapiens, Sus scrofa
Cell arrangementPairs
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium thermophilum RBL67, complete sequence.

Gene Summary

Adenine Count

455041 bp

Thymine Count

459080 bp

Guanine Count

691071 bp

Cytosine Count

686451 bp

Genome Length

2291643 bp

Protein-coding Genes

1685 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoenolpyruvate carboxylaseD805_RS00110Not AvailableNegative28343 - 31099102721.0
threonine/serine exporter thre family proteinD805_RS00115Not AvailablePositive31527 - 3332666418.8
dctp deaminaseD805_RS00120Not AvailablePositive33896 - 3447721523.4
maly/patb family proteinD805_RS00125Not AvailablePositive34820 - 3602245249.9
hypothetical proteinD805_RS00130Not AvailablePositive36088 - 362616757.84
alpha/beta fold hydrolaseD805_RS00135Not AvailableNegative36339 - 3739439698.2
s9 family peptidaseD805_RS00140Not AvailableNegative37531 - 4016495871.8
fhaa domain-containing proteinD805_RS00150Not AvailablePositive41193 - 4189425432.6
fha domain-containing proteinD805_RS00155Not AvailablePositive41919 - 4244318978.0
bofc c-terminal domain-containing proteinD805_RS00160Not AvailablePositive42450 - 4414759798.3

Displaying genes 21 – 30 of 1747 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

373 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 373 metabolites

Health Effects

No health effects information available for this bacterium.