Bifidobacterium thermophilum RBL67

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium thermophilum RBL67 is a heat-loving, Gram-positive bacterium that thrives in temperatures between 55°C and 65°C, placing it in the Thermophilic temperature preference category. Its metabolism is classified as a Heterotroph, meaning it obtains its energy by breaking down organic compounds. Specifically, it produces energy through fermentation, making it a type of chemoheterotroph. This bacterium is a non-motile, rod-shaped microbe, typically measuring 0.5-1.5 micrometers in length. As a Gram-positive bacterium, it has a thick peptidoglycan layer in its cell wall, which gives it a positive reaction when stained with Gram's stain. This characteristic, along with its shape, allows it to be easily identified under a microscope. Bifidobacterium thermophilum RBL67 can be found in various environments, including the gastrointestinal tracts of animals, as well as in soil and plant surfaces. Its ability to thrive in these diverse settings is due to its tolerance of varying oxygen levels. Specifically, it is classified as an Facultative Anaerobe, meaning it can grow in both aerobic and anaerobic conditions, but prefers aerobic environments. Finally, Bifidobacterium thermophilum RBL67 has been found to have potential applications in the production of lactic acid and other beneficial compounds. Additionally, its ability to ferment complex organic materials makes it a valuable tool in the breakdown and recycling of organic waste. Its remarkable heat tolerance also allows it to be used in the production of fermented foods, such as yogurt and cheese. Overall, Bifidobacterium thermophilum RBL67 is a versatile and heat-loving microbe with significant potential in various industrial and food-related applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium thermophilum
StrainRBL67

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbaby faeces; baby feces; infant faeces; infant feces
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementPairs
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium thermophilum RBL67


Gene Summary

Adenine Count

455041 bp

Thymine Count

459080 bp

Guanine Count

691071 bp

Cytosine Count

686451 bp

Genome Length

2291643 bp

Protein-coding Genes

1685 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaD805_RS00005Not Available+268 - 219070578.2
dna polymerase iii subunit betaD805_RS00010Not Available+2774 - 389841034.5
dna replication/repair protein recfD805_RS00015Not Available+4149 - 564253728.0
duf721 domain-containing proteinD805_RS00020Not Available+5639 - 611818040.8
dna topoisomerase (atp-hydrolyzing) subunit bD805_RS00025Not Available+6426 - 846575448.2
dna gyrase subunit aD805_RS00030Not Available+8589 - 1127699928.4
duf3566 domain-containing proteinD805_RS00035Not Available+11418 - 1192717889.8
alpha/beta hydrolaseD805_RS00040Not Available+12691 - 1392046344.2
vanz family proteinD805_RS00045Not Available+14013 - 1523344908.1
nadp-specific glutamate dehydrogenaseD805_RS00050Not Available-15350 - 1669649124.2

Displaying genes 1 – 10 of 1747 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

309 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 309 metabolites