Sorangium cellulosum So0157-2

Gram-negative

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Order

Polyangiales

Family

Polyangiaceae

Genus

Sorangium

Description

Sorangium cellulosum So0157-2 is a gram-negative bacterium notable for its unique characteristics and ecological significance. It possesses a single replicon, which is a defining feature of its genomic structure. The complete genomic information of Sorangium cellulosum So0157-2 can be accessed through the GenBank accession number NC_021658.1. This bacterium is part of the myxobacteria group, known for their complex life cycles and social behavior, including the ability to form multicellular structures and produce a variety of bioactive compounds. Sorangium cellulosum has garnered attention for its potential applications in biotechnology, particularly in the production of antibiotics and other pharmaceuticals. Ecologically, Sorangium cellulosum plays a role in the degradation of organic materials, thus contributing to nutrient cycling in its environment. Its gram-negative nature indicates that it has a distinctive outer membrane, which may provide advantages in diverse habitats by enabling it to interact with various substrates and resist certain environmental stresses. Overall, Sorangium cellulosum So0157-2 exemplifies the intricate relationships between microbial life and ecological processes, highlighting the importance of studying such organisms to understand their roles in environmental sustainability and potential applications in medicine and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
Class/taxonomy?kingdom=Pseudomonadati&level=klass&phylum=Myxococcota
OrderPolyangiales
FamilyPolyangiaceae
GenusSorangium
SpeciesSorangium cellulosum
StrainSo0157-2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sorangium cellulosum So0157-2, complete sequence.

Gene Summary

Adenine Count

2069067 bp

Thymine Count

2054874 bp

Guanine Count

5323755 bp

Cytosine Count

5334429 bp

Genome Length

14782125 bp

Protein-coding Genes

10869 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide exchange factor grpeSCE1572_RS00020Not AvailableNegative7612 - 819621039.6
aspartate aminotransferase family proteinSCE1572_RS00025Not AvailablePositive8572 - 983443601.3
had-ic family p-type atpaseSCE1572_RS54140Not AvailablePositive9836 - 1226282045.9
fur family transcriptional regulatorSCE1572_RS00035Not AvailableNegative12294 - 1280619026.7
hypothetical proteinSCE1572_RS00040Not AvailableNegative12908 - 1397838337.8
extensin family proteinSCE1572_RS00045Not AvailableNegative14049 - 1484328589.4
heat-inducible transcriptional repressor hrcaSCE1572_RS00050Not AvailablePositive15190 - 1623337653.3
rlua family pseudouridine synthaseSCE1572_RS00055Not AvailableNegative16226 - 1730839396.4
response regulator transcription factorSCE1572_RS00060Not AvailablePositive17496 - 1835929151.9
arnt family glycosyltransferaseSCE1572_RS00065Not AvailablePositive18583 - 21606107949.0

Displaying genes 21 – 30 of 10960 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1753 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1753 metabolites

Health Effects

No health effects information available for this bacterium.