Cupriavidus sp. HMR-1

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. HMR-1 is a Gram-negative bacterium that exhibits the presence of flagella, which indicates its motility. This characteristic suggests that the organism may possess the ability to navigate through various environments, potentially enhancing its survival and adaptability. The genomic structure of Cupriavidus sp. HMR-1 is characterized by a single replicon, which is significant as it can influence the organism's replication and genetic stability. The available genomic sequence is documented under the accession number ANKP00000000.1, providing a reference point for further studies and comparisons with other microbial species. The traits of Cupriavidus sp. HMR-1, particularly its motility and genomic features, may offer insights into its ecological roles. As a member of the Cupriavidus genus, this bacterium could be involved in biogeochemical cycles, such as the cycling of metals or organic compounds, due to its potential metabolic versatility. Understanding these traits can help elucidate the ecological functions of Cupriavidus sp. HMR-1 in its natural habitat, highlighting its significance in microbial communities and potential applications in bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. HMR-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. HMR-1 Contig287, whole genome shotgun sequence.

Gene Summary

Adenine Count

1196664 bp

Thymine Count

1204227 bp

Guanine Count

2129053 bp

Cytosine Count

2112438 bp

Genome Length

6642382 bp

Protein-coding Genes

6152 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integration host factor subunit alphaD769_24608Not AvailableNegative5228373 - 522878314941.6
phenylalanyl-trna ligase subunit betaD769_24613Not AvailableNegative5228868 - 523131589447.1
phenylalanyl-trna ligase subunit alphaD769_24618Not AvailableNegative5231393 - 523242438562.9
50s ribosomal protein l20D769_24623Not AvailableNegative5232633 - 523298913513.7
50s ribosomal protein l35D769_24628Not AvailableNegative5233018 - 52332157549.38
translation initiation factor if-3D769_24633Not AvailableNegative5233384 - 523385418078.3
threonyl-trna ligaseD769_24638Not AvailableNegative5233953 - 523586071871.6
Trna-valNot AvailableNot AvailablePositive5236258 - 5236334Not Available
(p)ppgpp synthetase i/gtp pyrophosphokinaseD769_24643Not AvailableNegative5236356 - 523858482916.1
hypothetical proteinD769_24648Not AvailableNegative5238601 - 523896313250.9

Displaying genes 4961 – 4970 of 6236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.