Cupriavidus sp. HMR-1

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. HMR-1 is a Gram-negative bacterium that exhibits the presence of flagella, which indicates its motility. This characteristic suggests that the organism may possess the ability to navigate through various environments, potentially enhancing its survival and adaptability. The genomic structure of Cupriavidus sp. HMR-1 is characterized by a single replicon, which is significant as it can influence the organism's replication and genetic stability. The available genomic sequence is documented under the accession number ANKP00000000.1, providing a reference point for further studies and comparisons with other microbial species. The traits of Cupriavidus sp. HMR-1, particularly its motility and genomic features, may offer insights into its ecological roles. As a member of the Cupriavidus genus, this bacterium could be involved in biogeochemical cycles, such as the cycling of metals or organic compounds, due to its potential metabolic versatility. Understanding these traits can help elucidate the ecological functions of Cupriavidus sp. HMR-1 in its natural habitat, highlighting its significance in microbial communities and potential applications in bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. HMR-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. HMR-1 Contig287, whole genome shotgun sequence.

Gene Summary

Adenine Count

1196664 bp

Thymine Count

1204227 bp

Guanine Count

2129053 bp

Cytosine Count

2112438 bp

Genome Length

6642382 bp

Protein-coding Genes

6152 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein ftslD769_24123Not AvailablePositive5126205 - 512652211532.8
penicillin-binding protein 3D769_24128Not AvailablePositive5126519 - 512833666093.9
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseD769_24133Not AvailablePositive5128333 - 512988054251.5
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate/d-alanyl-d-alanyl ligaseD769_24138Not AvailablePositive5129877 - 513127748625.1
phospho-n-acetylmuramoyl-pentapeptide- transferaseD769_24143Not AvailablePositive5131293 - 513246243062.9
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseD769_24148Not AvailablePositive5132513 - 513402753634.6
cell division protein ftswD769_24153Not AvailablePositive5134024 - 513526545191.7
undecaprenyldiphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferaseD769_24158Not AvailablePositive5135262 - 513633237518.9
udp-n-acetylmuramate--l-alanine ligaseD769_24163Not AvailablePositive5136343 - 513775849961.1
d-alanine--d-alanine ligaseD769_24168Not AvailablePositive5137755 - 513873835000.1

Displaying genes 4861 – 4870 of 6236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.