Cupriavidus sp. HMR-1

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. HMR-1 is a Gram-negative bacterium that exhibits the presence of flagella, which indicates its motility. This characteristic suggests that the organism may possess the ability to navigate through various environments, potentially enhancing its survival and adaptability. The genomic structure of Cupriavidus sp. HMR-1 is characterized by a single replicon, which is significant as it can influence the organism's replication and genetic stability. The available genomic sequence is documented under the accession number ANKP00000000.1, providing a reference point for further studies and comparisons with other microbial species. The traits of Cupriavidus sp. HMR-1, particularly its motility and genomic features, may offer insights into its ecological roles. As a member of the Cupriavidus genus, this bacterium could be involved in biogeochemical cycles, such as the cycling of metals or organic compounds, due to its potential metabolic versatility. Understanding these traits can help elucidate the ecological functions of Cupriavidus sp. HMR-1 in its natural habitat, highlighting its significance in microbial communities and potential applications in bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. HMR-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. HMR-1 Contig287, whole genome shotgun sequence.

Gene Summary

Adenine Count

1196664 bp

Thymine Count

1204227 bp

Guanine Count

2129053 bp

Cytosine Count

2112438 bp

Genome Length

6642382 bp

Protein-coding Genes

6152 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD769_19679Not AvailablePositive4187872 - 418817110383.9
dihydroxy-acid dehydrataseD769_19684Not AvailableNegative4188312 - 419017465623.6
hypothetical proteinD769_19689Not AvailableNegative4190518 - 419137830980.3
4-amino-4-deoxy-l-arabinose transferaseD769_19694Not AvailablePositive4191771 - 419346861915.9
small multidrug resistance transmembrane proteinD769_19699Not AvailablePositive4193465 - 419383613116.6
plp-dependent aminotransferase, udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferaseD769_19704Not AvailablePositive4193842 - 419501742588.3
udp-phosphate 4-deoxy-4-formamido-l-arabinose transferaseD769_19709Not AvailablePositive4194996 - 419599737647.4
formyltransferaseD769_19714Not AvailablePositive4195985 - 419691133281.8
hypothetical proteinD769_19719Not AvailablePositive4196923 - 41969721763.31
choline dehydrogenaseD769_19724Not AvailableNegative4196973 - 419817643160.1

Displaying genes 3971 – 3980 of 6236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.