Cupriavidus sp. HMR-1

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. HMR-1 is a Gram-negative bacterium that exhibits the presence of flagella, which indicates its motility. This characteristic suggests that the organism may possess the ability to navigate through various environments, potentially enhancing its survival and adaptability. The genomic structure of Cupriavidus sp. HMR-1 is characterized by a single replicon, which is significant as it can influence the organism's replication and genetic stability. The available genomic sequence is documented under the accession number ANKP00000000.1, providing a reference point for further studies and comparisons with other microbial species. The traits of Cupriavidus sp. HMR-1, particularly its motility and genomic features, may offer insights into its ecological roles. As a member of the Cupriavidus genus, this bacterium could be involved in biogeochemical cycles, such as the cycling of metals or organic compounds, due to its potential metabolic versatility. Understanding these traits can help elucidate the ecological functions of Cupriavidus sp. HMR-1 in its natural habitat, highlighting its significance in microbial communities and potential applications in bioremediation or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. HMR-1
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. HMR-1 Contig287, whole genome shotgun sequence.

Gene Summary

Adenine Count

1196664 bp

Thymine Count

1204227 bp

Guanine Count

2129053 bp

Cytosine Count

2112438 bp

Genome Length

6642382 bp

Protein-coding Genes

6152 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna m(5)u1939 methyltransferaseD769_07815Not AvailablePositive1644548 - 164594851025.4
hypothetical proteinD769_07820Not AvailableNegative1646012 - 164671924988.4
mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesteraseD769_07825Not AvailablePositive1647061 - 164748615249.3
radical sam enzyme, cfr family proteinD769_07830Not AvailablePositive1647536 - 164869042303.1
type iv pilus biogenesis protein pilfD769_07835Not AvailablePositive1648687 - 164946328638.0
hypothetical proteinD769_07840Not AvailablePositive1649456 - 165051135684.6
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseD769_07845Not AvailablePositive1650560 - 165185246288.6
histidyl-trna ligaseD769_07850Not AvailablePositive1651907 - 165325049640.3
hypothetical proteinD769_07855Not AvailablePositive1653334 - 165396623161.4
pyrrolo-quinoline quinone (pqq) dependent alcohol dehydrogenase subunitD769_07860Not AvailablePositive1654000 - 165515140392.1

Displaying genes 1611 – 1620 of 6236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.