Escherichia coli O145:H28 str. RM12581

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O145:H28 str. RM12581 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which coincides with the physiological temperature of many mammalian hosts, indicating its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli O145:H28 str. RM12581 possesses the metabolic flexibility to utilize both aerobic and anaerobic respiration, allowing it to survive in various microenvironments within its host. The ability to grow in diverse oxygen conditions suggests a versatile ecological role within the host's microbiome, potentially contributing to nutrient cycling and maintaining gut homeostasis. The physiological traits of this strain may offer insights into its interactions within host-associated environments, emphasizing the importance of understanding microbial communities in health and disease contexts. As research continues to uncover the functions and dynamics of such bacteria, E. coli O145:H28 str. RM12581 may represent a valuable model for studying host-microbe interactions in broader ecological settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO145:H28 RM12581

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O145:H28 str. RM12581
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O145:H28 str. RM12581


Gene Summary

Adenine Count

14256 bp

Thymine Count

16332 bp

Guanine Count

16410 bp

Cytosine Count

17564 bp

Genome Length

64562 bp

Protein-coding Genes

86 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
parm/stba family proteinECRM12581_RS28520Not Available+590 - 157335707.0
hypothetical proteinECRM12581_RS28525Not Available+1590 - 188310795.7
h-ns family nucleoid-associated regulatory proteinECRM12581_RS28530Not Available+1885 - 230416202.3
flhc family transcriptional regulatorECRM12581_RS28535Not Available-2364 - 291520624.0
helix-turn-helix domain-containing proteinECRM12581_RS28540Not Available-2912 - 31519032.79
is3 family transposaseECRM12581_RS28550Not Available+3208 - 442146178.1
helix-turn-helix domain-containing proteinECRM12581_RS28555Not Available-4465 - 483313797.2
transglycosylase slt domain-containing proteinECRM12581_RS28560Not Available-4844 - 537719354.0
transcriptional regulatorECRM12581_RS28565Not Available-5377 - 564910517.7
hypothetical proteinECRM12581_RS28570Not Available+6365 - 672713361.5

Displaying genes 1 – 10 of 5785 in total

Metabolites

54 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da

Displaying 1–10 of 54 metabolites