Helicobacter pylori OK310

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori OK310 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and presence of flagella. This organism typically resides in host-associated habitats, specifically within the gastric mucosa of humans and other mammals. It is noteworthy for its single-cell arrangement and does not exhibit mobility, despite having flagella. H. pylori OK310 thrives optimally at 37°C, falling within the mesophilic temperature range. The bacterium possesses two replicons and is distinguished by having two membranes. Its biotic relationship is classified as free-living, indicating that, while it is commonly found in association with hosts, it may also exist independently under certain conditions. Understanding the characteristics of H. pylori OK310 is crucial, particularly given its role in human health, including its association with gastric disorders. The microaerophilic nature of this bacterium suggests that it requires specific oxygen levels for optimal growth, which aligns with its habitat within the stomach, where oxygen is limited. The presence of two membranes may provide additional protective mechanisms against the acidic environment of the gastric lumen. Overall, H. pylori OK310 serves as an important model for studying host-microbe interactions and the ecological dynamics within the gastric microbiome, highlighting the complex relationships that exist between pathogenic bacteria and their human hosts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainOK310

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori OK310
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori OK310 plasmid pHPOK310, complete sequence.

Gene Summary

Adenine Count

1424 bp

Thymine Count

1220 bp

Guanine Count

759 bp

Cytosine Count

755 bp

Genome Length

4158 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinyl-diaminopimelate desuccinylaseHPOK310_RS01100Not AvailableNegative221609 - 22276042235.1
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgHPOK310_RS01105Not AvailableNegative222771 - 22463669808.1
slc13 family permeaseHPOK310_RS01110Not AvailablePositive224732 - 22639059989.4
phosphatidate cytidylyltransferaseHPOK310_RS01115Not AvailablePositive226403 - 22720328791.0
1-deoxy-d-xylulose-5-phosphate reductoisomeraseHPOK310_RS01120Not AvailablePositive227204 - 22831040211.4
hypothetical proteinHPOK310_RS01125Not AvailablePositive228361 - 22866011463.8
beta-1,4-n-acetylgalactosamyltransferaseHPOK310_RS01130Not AvailablePositive228672 - 22950232921.4
ybhb/ybcl family raf kinase inhibitor-like proteinHPOK310_RS01135Not AvailableNegative229518 - 23014723924.9
helix-turn-helix domain-containing proteinHPOK310_RS01140Not AvailablePositive230213 - 23067417855.8
nifs family cysteine desulfuraseHPOK310_RS01145Not AvailablePositive230846 - 23200942536.0

Displaying genes 221 – 230 of 1545 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.