Campylobacter showae CSUNSWCD

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter showae, identified through its genomic accession AMZQ00000000.1, is a Gram-negative bacterium that exhibits aerobic respiration. This organism is characterized by having a single replicon, which is indicative of its genetic structure and replication capabilities. As a member of the Campylobacter genus, C. showae contributes to the diverse ecological roles that Campylobacter species play in various environments. While specific details about its habitat or pathogenicity are not provided, the aerobic nature of this organism suggests that it thrives in oxygen-rich environments. Campylobacter species are often associated with gastrointestinal infections in humans and animals, and their ecological niches can include the intestines of birds and other animals, as well as contaminated environments. The presence of C. showae in ecological systems may have implications for understanding the dynamics of microbial communities, particularly in relation to food safety and zoonotic disease transmission. Given its classification as a Campylobacter species, further research may be necessary to elucidate its specific roles in health and disease, as well as its environmental interactions, highlighting the importance of monitoring such bacteria in both clinical and ecological studies.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter showae
StrainCSUNSWCD

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter showae CSUNSWCD
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter showae CSUNSWCD Contig_23, whole genome shotgun

Gene Summary

Adenine Count

591639 bp

Thymine Count

574449 bp

Guanine Count

487304 bp

Cytosine Count

471781 bp

Genome Length

2125173 bp

Protein-coding Genes

2443 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
restriction modification system dna specificity domain proteinCSUNSWCD_933Not AvailablePositive1853867 - 185445122083.5
type i restriction-modification system, dna-methyltransferase subunit mCSUNSWCD_934Not AvailablePositive1854453 - 185594356256.0
type i restriction-modification system, specificity subunit sCSUNSWCD_935Not AvailablePositive1855940 - 185706743036.0
hypothetical proteinCSUNSWCD_936Not AvailablePositive1857064 - 185779228109.8
type i restriction-modification system, restriction subunit rCSUNSWCD_937Not AvailablePositive1857904 - 1860981117624.0
putative metal-dependent hydrolaseCSUNSWCD_938Not AvailablePositive1860971 - 186163626701.6
hypothetical proteinCSUNSWCD_939Not AvailableNegative1861753 - 18619085912.9
hypothetical proteinCSUNSWCD_940Not AvailableNegative1861905 - 18620184158.21
hypothetical proteinCSUNSWCD_941Not AvailablePositive1862206 - 18623615751.16
formate dehydrogenase chain dCSUNSWCD_942Not AvailablePositive1862567 - 186334928502.5

Displaying genes 2261 – 2270 of 2525 in total

Metabolites

488 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 488 metabolites

Health Effects

No health effects information available for this bacterium.