Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and chains or singles cell arrangement. It is a chemoorganotroph, utilizing organic compounds as its energy source. This strain is associated with host organisms, indicating its role in various biological interactions within host environments. The bacterium possesses flagella, enabling motility, but it does not exhibit mobility as a free-living organism. It is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical body temperature of warm-blooded hosts. The strain has a complex genomic structure, featuring three replicons and two membranes, characteristic of many Gram-negative bacteria. The presence of multiple replicons suggests potential genetic diversity and adaptability, which may play a role in its survival and pathogenicity. The ecological relationship of Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K as a free-living organism within host-associated environments highlights its potential to thrive in a variety of ecological niches, potentially impacting both its hosts and surrounding microbial communities. Accessions associated with this strain include NZ_CP022141.1, NZ_CP022139.1, and NZ_CP022140.1, which provide genomic insights for further understanding of its biology and interactions within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. salamae serovar 55:k:z39 1315K

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K

Gene Summary

Adenine Count

1169396 bp

Thymine Count

1170847 bp

Guanine Count

1262262 bp

Cytosine Count

1256539 bp

Genome Length

4859044 bp

Protein-coding Genes

4387 genes

Non-Coding Genes

292 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferaseLFZ47_RS07920Not AvailableNegative1585693 - 158733961703.4
4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylaseLFZ47_RS07925Not AvailableNegative1587336 - 158823533198.0
bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arnaLFZ47_RS07930Not AvailableNegative1588232 - 159021473377.0
undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferaseLFZ47_RS07935Not AvailableNegative1590211 - 159119436448.5
udp-4-amino-4-deoxy-l-arabinose aminotransferaseLFZ47_RS07940Not AvailableNegative1591197 - 159233641304.7
lipopolysaccharide core heptose(ii)-phosphate phosphatase pmrgLFZ47_RS07945Not AvailablePositive1592636 - 159324122037.7
nucleoside triphosphatase nudiLFZ47_RS07950Not AvailableNegative1593287 - 159371216352.6
yfaz family proteinLFZ47_RS07955Not AvailablePositive1593991 - 159453318655.7
nicotinamide mononucleotide deamidase-related protein yfayLFZ47_RS07960Not AvailablePositive1594648 - 159584443751.5
spi-2 type iii secretion system effector deubiquitinase sselLFZ47_RS07965Not AvailableNegative1595942 - 159696438208.5

Displaying genes 1731 – 1740 of 4876 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.