Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and chains or singles cell arrangement. It is a chemoorganotroph, utilizing organic compounds as its energy source. This strain is associated with host organisms, indicating its role in various biological interactions within host environments. The bacterium possesses flagella, enabling motility, but it does not exhibit mobility as a free-living organism. It is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical body temperature of warm-blooded hosts. The strain has a complex genomic structure, featuring three replicons and two membranes, characteristic of many Gram-negative bacteria. The presence of multiple replicons suggests potential genetic diversity and adaptability, which may play a role in its survival and pathogenicity. The ecological relationship of Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K as a free-living organism within host-associated environments highlights its potential to thrive in a variety of ecological niches, potentially impacting both its hosts and surrounding microbial communities. Accessions associated with this strain include NZ_CP022141.1, NZ_CP022139.1, and NZ_CP022140.1, which provide genomic insights for further understanding of its biology and interactions within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. salamae serovar 55:k:z39 1315K

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K

Gene Summary

Adenine Count

1169396 bp

Thymine Count

1170847 bp

Guanine Count

1262262 bp

Cytosine Count

1256539 bp

Genome Length

4859044 bp

Protein-coding Genes

4387 genes

Non-Coding Genes

292 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron/manganese abc transporter permease subunit sitdLFZ47_RS05625Not AvailableNegative1115034 - 111588230090.0
iron/manganese abc transporter permease subunit sitcLFZ47_RS05630Not AvailableNegative1115873 - 111673330895.0
iron/manganese abc transporter atp-binding protein sitbLFZ47_RS05635Not AvailableNegative1116730 - 111755129783.7
iron/manganese abc transporter substrate-binding protein sitaLFZ47_RS05640Not AvailableNegative1117548 - 111846533771.5
nitrous oxide-stimulated promoter family proteinLFZ47_RS05645Not AvailablePositive1118647 - 111899113565.8
formate hydrogenlyase transcriptional activator flhaLFZ47_RS05650Not AvailableNegative1119053 - 112113178139.1
hydrogenase expression/formation protein hypeLFZ47_RS05655Not AvailableNegative1121350 - 112236035252.6
hydrogenase formation protein hypdLFZ47_RS05660Not AvailableNegative1122357 - 112347841599.1
hydrogenase 3 maturation protein hypcLFZ47_RS05665Not AvailableNegative1123478 - 11237509758.67
hydrogenase nickel incorporation protein hypbLFZ47_RS05670Not AvailableNegative1123741 - 112461331366.6

Displaying genes 1321 – 1330 of 4876 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.