Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and chains or singles cell arrangement. It is a chemoorganotroph, utilizing organic compounds as its energy source. This strain is associated with host organisms, indicating its role in various biological interactions within host environments. The bacterium possesses flagella, enabling motility, but it does not exhibit mobility as a free-living organism. It is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical body temperature of warm-blooded hosts. The strain has a complex genomic structure, featuring three replicons and two membranes, characteristic of many Gram-negative bacteria. The presence of multiple replicons suggests potential genetic diversity and adaptability, which may play a role in its survival and pathogenicity. The ecological relationship of Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K as a free-living organism within host-associated environments highlights its potential to thrive in a variety of ecological niches, potentially impacting both its hosts and surrounding microbial communities. Accessions associated with this strain include NZ_CP022141.1, NZ_CP022139.1, and NZ_CP022140.1, which provide genomic insights for further understanding of its biology and interactions within ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
Strainsubsp. salamae serovar 55:k:z39 1315K

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K

Gene Summary

Adenine Count

1169396 bp

Thymine Count

1170847 bp

Guanine Count

1262262 bp

Cytosine Count

1256539 bp

Genome Length

4859044 bp

Protein-coding Genes

4387 genes

Non-Coding Genes

292 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sctn family type iii secretion system atpase invcLFZ47_RS05475Not AvailablePositive1086861 - 108815647585.3
spi-1 type iii secretion system protein spamLFZ47_RS05480Not AvailablePositive1088134 - 108857718099.8
spi-1 type iii secretion system protein spanLFZ47_RS05485Not AvailablePositive1088577 - 108958736516.6
yscq/hrcq family type iii secretion apparatus proteinLFZ47_RS05490Not AvailablePositive1089587 - 109049833592.4
spi-1 type iii secretion system export apparatus protein spapLFZ47_RS05495Not AvailablePositive1090488 - 109116225233.2
spi-1 type iii secretion system export apparatus protein spaqLFZ47_RS05500Not AvailablePositive1091188 - 10914489359.9
spi-1 type iii secretion system export apparatus protein sparLFZ47_RS05505Not AvailablePositive1091452 - 109224328523.4
spi-1 type iii secretion system export apparatus protein spasLFZ47_RS05510Not AvailablePositive1092230 - 109330040090.8
sycd/lcrh family type iii secretion system chaperone sicaLFZ47_RS05515Not AvailablePositive1093438 - 109393519221.7
spi-1 type iii secretion system needle tip complex protein sipbLFZ47_RS05520Not AvailablePositive1093938 - 109571962559.5

Displaying genes 1291 – 1300 of 4876 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.