Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Litoreibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Litoreibacter |
| Species | Litoreibacter halocynthiae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | sphere |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
769613 bp
Thymine Count
770530 bp
Guanine Count
1069741 bp
Cytosine Count
1070229 bp
Genome Length
3680113 bp
Protein-coding Genes
3571 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino-acid dehydrogenase | BDE40_3504 | Not Available | Positive | 3493473 - 3494789 | 47107.4 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | BDE40_3505 | Not Available | Positive | 3494816 - 3495802 | 35309.2 |
| trap-type c4-dicarboxylate transport system permease small subunit | BDE40_3506 | Not Available | Positive | 3495871 - 3496584 | 26039.4 |
| tripartite atp-independent transporter dctm subunit | BDE40_3507 | Not Available | Positive | 3496581 - 3497882 | 46945.4 |
| hypothetical protein | BDE40_3508 | Not Available | Positive | 3497885 - 3498559 | 24606.5 |
| pimeloyl-acp methyl ester carboxylesterase | BDE40_3509 | Not Available | Negative | 3498689 - 3499504 | 30697.4 |
| l-2,4-diaminobutyrate transaminase | BDE40_3510 | Not Available | Positive | 3500058 - 3501431 | 49845.4 |
| ectoine hydrolase | BDE40_3511 | Not Available | Positive | 3501452 - 3502636 | 43962.2 |
| acetylornithine deacetylase | BDE40_3512 | Not Available | Positive | 3502641 - 3503807 | 42030.1 |
| integrase | BDE40_3513 | Not Available | Positive | 3504371 - 3505573 | 44778.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
