Chryseobacterium nakagawai

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai is a rod-shaped bacterium characterized by a single replicon in its genomic structure. It has been cataloged under the accession number NZ_LR134386.1, which provides a reference point for further genetic and taxonomic studies. This species belongs to the genus Chryseobacterium, which is known for its diverse ecological niches and ability to thrive in various environments. Members of this genus are typically found in soil, water, and as part of the microbiota associated with plants and animals. The ecological role of Chryseobacterium nakagawai, while not fully detailed in the available traits, may align with the broader behaviors exhibited by related species, such as contributing to nutrient cycling and possessing potential biotechnological applications. Understanding the characteristics of Chryseobacterium nakagawai, including its shape and genomic structure, is crucial for further research into its ecological interactions and potential uses in biotechnology or environmental microbiology. The single replicon indicates a streamlined genomic organization, which can be a factor in its adaptability and function within various ecosystems. Overall, Chryseobacterium nakagawai exemplifies the diversity and ecological significance of the Chryseobacterium genus within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain NCTC13529 chromosome 1, complete

Gene Summary

Adenine Count

1810517 bp

Thymine Count

1808961 bp

Guanine Count

992818 bp

Cytosine Count

990205 bp

Genome Length

5602501 bp

Protein-coding Genes

4997 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-carotene 15,15'-monooxygenaseEL260_RS00120Not AvailableNegative27742 - 2847927397.8
hypothetical proteinEL260_RS00125Not AvailableNegative28551 - 2927628589.7
aminodeoxychorismate synthase component iEL260_RS00130Not AvailablePositive29322 - 3029937760.3
aminotransferase class ivEL260_RS00135Not AvailablePositive30283 - 3090924793.7
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthaseEL260_RS00140Not AvailableNegative30906 - 3258264448.6
isopenicillin n synthase family dioxygenaseEL260_RS00145Not AvailablePositive32667 - 3361735909.6
bacteriocin-like proteinEL260_RS00150Not AvailableNegative33662 - 339319036.61
bacteriocin-like proteinEL260_RS25395Not AvailablePositive34148 - 343125906.25
bacteriocin-like proteinEL260_RS00155Not AvailablePositive34455 - 346256428.81
pa0069 family radical sam proteinEL260_RS00160Not AvailableNegative34665 - 3571140077.2

Displaying genes 81 – 90 of 5154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.