Chryseobacterium nakagawai

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai is a rod-shaped bacterium characterized by a single replicon in its genomic structure. It has been cataloged under the accession number NZ_LR134386.1, which provides a reference point for further genetic and taxonomic studies. This species belongs to the genus Chryseobacterium, which is known for its diverse ecological niches and ability to thrive in various environments. Members of this genus are typically found in soil, water, and as part of the microbiota associated with plants and animals. The ecological role of Chryseobacterium nakagawai, while not fully detailed in the available traits, may align with the broader behaviors exhibited by related species, such as contributing to nutrient cycling and possessing potential biotechnological applications. Understanding the characteristics of Chryseobacterium nakagawai, including its shape and genomic structure, is crucial for further research into its ecological interactions and potential uses in biotechnology or environmental microbiology. The single replicon indicates a streamlined genomic organization, which can be a factor in its adaptability and function within various ecosystems. Overall, Chryseobacterium nakagawai exemplifies the diversity and ecological significance of the Chryseobacterium genus within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain NCTC13529 chromosome 1, complete

Gene Summary

Adenine Count

1810517 bp

Thymine Count

1808961 bp

Guanine Count

992818 bp

Cytosine Count

990205 bp

Genome Length

5602501 bp

Protein-coding Genes

4997 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp_00010EL260_RS00070Not AvailablePositive15055 - 15633Not Available
duf502 domain-containing proteinEL260_RS00075Not AvailablePositive15659 - 1627622769.9
tryptophanaseEL260_RS00080Not AvailablePositive16368 - 1774451932.8
fad-dependent monooxygenaseEL260_RS00085Not AvailablePositive17909 - 1906644487.3
pyridoxal phosphate-dependent aminotransferaseEL260_RS00090Not AvailablePositive19070 - 2022742800.9
tonb-dependent receptor plug domain-containing proteinEL260_RS00095Not AvailablePositive20390 - 2282889711.2
pqq-dependent sugar dehydrogenaseEL260_RS00100Not AvailableNegative22939 - 2415644822.0
excinuclease abc subunit uvrbEL260_RS00105Not AvailablePositive24343 - 2633475214.2
duf3820 family proteinEL260_RS00110Not AvailableNegative26404 - 266318489.71
ai-2e family transporterEL260_RS00115Not AvailableNegative26651 - 2773039693.0

Displaying genes 71 – 80 of 5154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.