Chryseobacterium nakagawai

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nakagawai is a rod-shaped bacterium characterized by a single replicon in its genomic structure. It has been cataloged under the accession number NZ_LR134386.1, which provides a reference point for further genetic and taxonomic studies. This species belongs to the genus Chryseobacterium, which is known for its diverse ecological niches and ability to thrive in various environments. Members of this genus are typically found in soil, water, and as part of the microbiota associated with plants and animals. The ecological role of Chryseobacterium nakagawai, while not fully detailed in the available traits, may align with the broader behaviors exhibited by related species, such as contributing to nutrient cycling and possessing potential biotechnological applications. Understanding the characteristics of Chryseobacterium nakagawai, including its shape and genomic structure, is crucial for further research into its ecological interactions and potential uses in biotechnology or environmental microbiology. The single replicon indicates a streamlined genomic organization, which can be a factor in its adaptability and function within various ecosystems. Overall, Chryseobacterium nakagawai exemplifies the diversity and ecological significance of the Chryseobacterium genus within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nakagawai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nakagawai strain NCTC13529 chromosome 1, complete

Gene Summary

Adenine Count

1810517 bp

Thymine Count

1808961 bp

Guanine Count

992818 bp

Cytosine Count

990205 bp

Genome Length

5602501 bp

Protein-coding Genes

4997 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative dna-binding proteinEL260_RS21970Not AvailablePositive4892509 - 489295216670.0
Large terminaseEL260_RS21975Not AvailablePositive4892952 - 489454761947.0
phage protein gp36 family proteinEL260_RS21980Not AvailablePositive4894551 - 489500917573.0
Head morphogenesis proteinEL260_RS21985Not AvailablePositive4895066 - 489758896475.9
Tail length tape-measure proteinEL260_RS21990Not AvailablePositive4897593 - 489959372585.1
Hypothetical proteinEL260_RS21995Not AvailablePositive4899595 - 490014921521.9
AttlNot AvailableNot AvailablePositive5097875 - 5097886Not Available
AttlNot AvailableNot AvailablePositive5097888 - 5097899Not Available
Tyrosine-type recombinase/integraseEL260_RS23020Not AvailableNegative5110083 - 511097034381.7
30s ribosomal protein s21EL260_RS23025Not AvailableNegative5111049 - 51112467549.34

Displaying genes 21 – 30 of 5154 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.