Campylobacter fetus subsp. fetus 04/554

Gram-negativeSpirillaMotileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter fetus subsp. fetus 04/554 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and ability to form chains or exist as singles. This organism is motile, possessing flagella that facilitate its movement. Campylobacter fetus subsp. fetus is mesophilic, thriving within a temperature range conducive to many biological processes. This bacterium is associated with hosts, indicating a biotic relationship where it can exist freely in the environment. Notably, it has two replicons and is surrounded by two membranes, a trait typical of Gram-negative bacteria. The presence of two membranes likely contributes to its ability to interact with various environments, including those associated with its hosts. The accessions for this strain are NZ_CP008809.1 and NZ_CP008808.1, which provide genomic information for further study. Understanding the ecological role of Campylobacter fetus subsp. fetus can shed light on its interactions within host systems and its potential impact on health. Its microaerophilic nature suggests that it may thrive in environments with limited oxygen, such as the gastrointestinal tracts of animals, where it may play a role in digestion or other metabolic processes. The ability to be free-living also hints at its adaptability and potential for survival outside strictly defined host environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter fetus
Strainsubsp. fetus 04/554

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Campylobacter fetus subsp. fetus 04/554
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter fetus subsp. fetus 04/554


Gene Summary

Adenine Count

608856 bp

Thymine Count

593915 bp

Guanine Count

301786 bp

Cytosine Count

296207 bp

Genome Length

1800764 bp

Protein-coding Genes

1806 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s4CFF04554_RS00290Not AvailablePositive45439 - 4606523874.1
dna-directed rna polymerase subunit alphaCFF04554_RS00295Not AvailablePositive46078 - 4707637337.8
50s ribosomal protein l17CFF04554_RS00300Not AvailablePositive47095 - 4745113349.4
nifu family proteinCFF04554_RS00305Not AvailablePositive47676 - 479429707.9
hypothetical proteinCFF04554_RS00310Not AvailablePositive47932 - 4848020862.9
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseCFF04554_RS00315Not AvailablePositive48461 - 4975047188.4
aspartate 1-decarboxylaseCFF04554_RS00320Not AvailablePositive49770 - 5011713017.9
methyl-accepting chemotaxis proteinCFF04554_RS00325Not AvailablePositive50605 - 5225160884.9
ybab/ebfc family nucleoid-associated proteinCFF04554_RS00330Not AvailablePositive52317 - 5262811077.3
pdz domain-containing proteinCFF04554_RS00335Not AvailablePositive52630 - 5370640157.3

Displaying genes 81 – 90 of 1905 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

250 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 250 metabolites

Health Effects

No health effects information available for this bacterium.