Campylobacter fetus subsp. fetus 04/554

Gram-negativeSpirillaMotileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter fetus subsp. fetus 04/554 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and ability to form chains or exist as singles. This organism is motile, possessing flagella that facilitate its movement. Campylobacter fetus subsp. fetus is mesophilic, thriving within a temperature range conducive to many biological processes. This bacterium is associated with hosts, indicating a biotic relationship where it can exist freely in the environment. Notably, it has two replicons and is surrounded by two membranes, a trait typical of Gram-negative bacteria. The presence of two membranes likely contributes to its ability to interact with various environments, including those associated with its hosts. The accessions for this strain are NZ_CP008809.1 and NZ_CP008808.1, which provide genomic information for further study. Understanding the ecological role of Campylobacter fetus subsp. fetus can shed light on its interactions within host systems and its potential impact on health. Its microaerophilic nature suggests that it may thrive in environments with limited oxygen, such as the gastrointestinal tracts of animals, where it may play a role in digestion or other metabolic processes. The ability to be free-living also hints at its adaptability and potential for survival outside strictly defined host environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter fetus
Strainsubsp. fetus 04/554

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Campylobacter fetus subsp. fetus 04/554
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter fetus subsp. fetus 04/554 chromosome, complete

Gene Summary

Adenine Count

608856 bp

Thymine Count

593915 bp

Guanine Count

301786 bp

Cytosine Count

296207 bp

Genome Length

1800764 bp

Protein-coding Genes

1806 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylglycinamide formyltransferaseCFF04554_RS08515Not AvailableNegative1679772 - 168035921662.3
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseCFF04554_RS08520Not AvailableNegative1680350 - 168173549593.8
yifb family mg chelatase-like aaa atpaseCFF04554_RS08525Not AvailableNegative1681732 - 168324655982.0
peptide deformylaseCFF04554_RS08530Not AvailableNegative1683243 - 168376119867.1
ggdef domain-containing proteinCFF04554_RS08535Not AvailableNegative1683762 - 168484441332.8
atp-dependent clp endopeptidase proteolytic subunit clppCFF04554_RS08540Not AvailableNegative1684856 - 168544621799.4
trigger factorCFF04554_RS08545Not AvailableNegative1685446 - 168675349391.2
gtp cyclohydrolase i foleCFF04554_RS08550Not AvailablePositive1686887 - 168747422267.1
flagellar protein export atpase fliiCFF04554_RS08555Not AvailablePositive1687471 - 168877547039.5
nifs family cysteine desulfuraseCFF04554_RS08560Not AvailablePositive1688972 - 169016243094.6

Displaying genes 1741 – 1750 of 1905 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

250 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 250 metabolites

Health Effects

No health effects information available for this bacterium.