Dickeya solani RNS 08.23.3.1.A

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya solani RNS 08.23.3.1.A is a rod-shaped bacterium characterized by the presence of flagella, which suggests it is motile. This organism exhibits a single replicon, indicating it has a streamlined genetic structure that may facilitate efficient replication and adaptation. The accession number for this strain is NZ_CP016928.1, which allows for its identification and retrieval from genomic databases. As a member of the Dickeya genus, this bacterium is known for its role as a plant pathogen, particularly affecting crops such as potatoes. The flagellar motility may enhance its ability to colonize plant tissues and contribute to its pathogenicity. Understanding the specific traits of Dickeya solani RNS 08.23.3.1.A, including its morphology and genetic configuration, is crucial for developing control strategies in agricultural settings. Biologically, the presence of a single replicon may provide insights into the organism's evolutionary adaptations to its niche. The streamlined genome could reflect a specialization that allows for more rapid responses to environmental pressures, such as host plant defenses. Ecologically, the motility conferred by flagella may facilitate the spread of this pathogen within agricultural systems, making it an important subject for research aimed at understanding and managing plant diseases caused by Dickeya species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya solani
StrainRNS 08.23.3.1.A

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya solani RNS 08.23.3.1.A chromosome, complete genome.

Gene Summary

Adenine Count

1077463 bp

Thymine Count

1075902 bp

Guanine Count

1378061 bp

Cytosine Count

1391042 bp

Genome Length

4922468 bp

Protein-coding Genes

4143 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ig-like domain-containing proteinD083_RS16755Not AvailablePositive3795278 - 3805135325561.0
tolc family proteinD083_RS16760Not AvailablePositive3805148 - 380667458147.4
efflux rnd transporter periplasmic adaptor subunitD083_RS16765Not AvailablePositive3806671 - 380762134065.8
efflux rnd transporter periplasmic adaptor subunitD083_RS16770Not AvailablePositive3807614 - 380897850805.2
biotin/lipoyl-binding proteinD083_RS16775Not AvailablePositive3808981 - 381106278562.5
bug family tripartite tricarboxylate transporter substrate binding proteinD083_RS16780Not AvailablePositive3811095 - 381208136221.3
bug family tripartite tricarboxylate transporter substrate binding proteinD083_RS16785Not AvailablePositive3812132 - 381311836612.1
mfs transporterD083_RS16790Not AvailablePositive3813348 - 381456243088.2
gyri-like domain-containing proteinD083_RS16795Not AvailablePositive3814718 - 381519117619.5
sulfite exporter taue/safe family proteinD083_RS16800Not AvailableNegative3815375 - 381613927859.0

Displaying genes 3311 – 3320 of 4279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.