Dickeya solani RNS 08.23.3.1.A

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya solani RNS 08.23.3.1.A is a rod-shaped bacterium characterized by the presence of flagella, which suggests it is motile. This organism exhibits a single replicon, indicating it has a streamlined genetic structure that may facilitate efficient replication and adaptation. The accession number for this strain is NZ_CP016928.1, which allows for its identification and retrieval from genomic databases. As a member of the Dickeya genus, this bacterium is known for its role as a plant pathogen, particularly affecting crops such as potatoes. The flagellar motility may enhance its ability to colonize plant tissues and contribute to its pathogenicity. Understanding the specific traits of Dickeya solani RNS 08.23.3.1.A, including its morphology and genetic configuration, is crucial for developing control strategies in agricultural settings. Biologically, the presence of a single replicon may provide insights into the organism's evolutionary adaptations to its niche. The streamlined genome could reflect a specialization that allows for more rapid responses to environmental pressures, such as host plant defenses. Ecologically, the motility conferred by flagella may facilitate the spread of this pathogen within agricultural systems, making it an important subject for research aimed at understanding and managing plant diseases caused by Dickeya species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya solani
StrainRNS 08.23.3.1.A

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya solani RNS 08.23.3.1.A chromosome, complete genome.

Gene Summary

Adenine Count

1077463 bp

Thymine Count

1075902 bp

Guanine Count

1378061 bp

Cytosine Count

1391042 bp

Genome Length

4922468 bp

Protein-coding Genes

4143 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
universal stress protein uspaD083_RS11465Not AvailableNegative2672080 - 267251416085.3
universal stress protein uspbD083_RS11470Not AvailablePositive2673094 - 267342912902.1
inorganic phosphate transporter pitaD083_RS11475Not AvailableNegative2673565 - 267507354244.4
nad(p)/fad-dependent oxidoreductaseD083_RS11480Not AvailablePositive2675390 - 267657442866.5
aaa family atpaseD083_RS11485Not AvailablePositive2676669 - 267813254911.5
hypothetical proteinD083_RS11490Not AvailablePositive2678116 - 267874823287.4
duf1471 domain-containing proteinD083_RS11495Not AvailableNegative2678871 - 26791228260.75
endonuclease/exonuclease/phosphatase family proteinD083_RS11500Not AvailableNegative2679321 - 268018431818.9
integrase arm-type dna-binding domain-containing proteinD083_RS11505Not AvailableNegative2680212 - 268134141251.4
carbohydrate abc transporter permeaseD083_RS11510Not AvailableNegative2681346 - 268239238797.4

Displaying genes 2271 – 2280 of 4279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.