Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | EI293_04330 | Not Available | Positive | 1002021 - 1003058 | 39468.9 |
| hypothetical protein | EI293_04335 | Not Available | Positive | 1003275 - 1003658 | 13827.5 |
| Trna-asn | Not Available | Not Available | Positive | 1003755 - 1003831 | Not Available |
| t9ss c-terminal target domain-containing protein | EI293_04345 | Not Available | Negative | 1004024 - 1005814 | 64934.4 |
| t9ss c-terminal target domain-containing protein | EI293_04350 | Not Available | Positive | 1006229 - 1008109 | 67263.3 |
| glycoside hydrolase family 43 protein | EI293_04355 | Not Available | Negative | 1008248 - 1009948 | 62798.6 |
| glycosyhydrolase | EI293_04360 | Not Available | Negative | 1010100 - 1012643 | 93080.0 |
| endo-1,4-beta-xylanase | EI293_04365 | Not Available | Negative | 1012777 - 1013868 | 42154.0 |
| sodium transporter | EI293_04370 | Not Available | Negative | 1013917 - 1015605 | 61075.0 |
| xylose isomerase | EI293_04375 | Not Available | Negative | 1015836 - 1017167 | 50086.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
