Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna/rna non-specific endonuclease | EI293_03715 | Not Available | Negative | 870706 - 871593 | 31123.0 |
| t9ss c-terminal target domain-containing protein | EI293_03720 | Not Available | Negative | 872050 - 874278 | 78626.2 |
| sigma-54-dependent fis family transcriptional regulator | EI293_03725 | Not Available | Positive | 874598 - 875965 | 51293.8 |
| pas domain s-box protein | EI293_03730 | Not Available | Positive | 875988 - 879563 | 133848.0 |
| fad-dependent oxidoreductase | EI293_03735 | Not Available | Positive | 879592 - 880677 | 38226.0 |
| t9ss c-terminal target domain-containing protein | EI293_03740 | Not Available | Negative | 881108 - 881488 | 14153.5 |
| nad(p)/fad-dependent oxidoreductase | EI293_03745 | Not Available | Positive | 881661 - 882779 | 41172.8 |
| type iii polyketide synthase | EI293_03750 | Not Available | Positive | 882869 - 884032 | 41909.5 |
| methyltransferase domain-containing protein | EI293_03755 | Not Available | Positive | 884147 - 884857 | 27418.9 |
| histone deacetylase | EI293_03760 | Not Available | Negative | 884927 - 885832 | 33527.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
