Hymenobacter perfusus str. LMG 26000

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter perfusus str. LMG 26000 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is an important aspect of its genetic organization. The genomic information for this strain is cataloged under the accession number RWIU00000000.1. In terms of ecological significance, members of the Hymenobacter genus are often found in various environmental niches, particularly in soil and aquatic habitats. This suggests that Hymenobacter perfusus may play a role in nutrient cycling and the degradation of organic materials within these ecosystems. The Gram-negative nature of this bacterium also indicates that it possesses an outer membrane, which could provide advantages in specific environmental conditions, such as resistance to certain antibiotics or environmental stresses. Overall, Hymenobacter perfusus str. LMG 26000 contributes to our understanding of microbial diversity and function in natural environments. Its characteristics may provide insights into the ecological roles of Gram-negative bacteria in soil and water systems, emphasizing their importance in maintaining ecological balance and contributing to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter perfusus
StrainLMG 26000

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter perfusus strain LMG 26000

Gene Summary

Adenine Count

1016850 bp

Thymine Count

1014209 bp

Guanine Count

1540436 bp

Cytosine Count

1541877 bp

Genome Length

5114284 bp

Protein-coding Genes

4305 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box proteinEI293_03615Not AvailablePositive846403 - 84861682585.3
stas domain-containing proteinEI293_03620Not AvailablePositive848744 - 84911813843.9
duf1345 domain-containing proteinEI293_03625Not AvailableNegative849113 - 84980224249.1
nicotinate phosphoribosyltransferaseEI293_03630Not AvailablePositive849860 - 85134754555.1
hypothetical proteinEI293_03635Not AvailableNegative851373 - 85207727446.4
duf4240 domain-containing proteinEI293_03640Not AvailableNegative852079 - 85261220253.6
copper chaperoneEI293_03645Not AvailablePositive852798 - 8530137629.15
phosphoribosylformylglycinamidine cyclo-ligaseEI293_03650Not AvailableNegative853155 - 85442645341.6
amidophosphoribosyltransferaseEI293_03655Not AvailableNegative854450 - 85596155729.6
phosphoribosylglycinamide formyltransferaseEI293_03660Not AvailableNegative856043 - 85673524938.8

Displaying genes 721 – 730 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.