Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| meta domain-containing protein | EI293_03455 | Not Available | Positive | 800626 - 801060 | 15759.9 |
| hypothetical protein | EI293_03460 | Not Available | Negative | 801260 - 804181 | 108264.0 |
| peptide-methionine (s)-s-oxide reductase | EI293_03465 | Not Available | Positive | 804304 - 804987 | 24981.6 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EI293_03470 | Not Available | Positive | 805206 - 806390 | 43126.6 |
| amidohydrolase | EI293_03475 | Not Available | Positive | 806463 - 807257 | 30278.3 |
| t9ss c-terminal target domain-containing protein | EI293_03480 | Not Available | Negative | 807316 - 809616 | 82473.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | EI293_03485 | Not Available | Positive | 809680 - 810981 | 46566.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | EI293_03490 | Not Available | Negative | 811064 - 811606 | 20192.0 |
| glycosyltransferase family 1 protein | EI293_03495 | Not Available | Negative | 811658 - 812788 | 41949.8 |
| cytochrome c | EI293_03500 | Not Available | Positive | 812956 - 813717 | 27071.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
