Hymenobacter perfusus str. LMG 26000

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter perfusus str. LMG 26000 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is an important aspect of its genetic organization. The genomic information for this strain is cataloged under the accession number RWIU00000000.1. In terms of ecological significance, members of the Hymenobacter genus are often found in various environmental niches, particularly in soil and aquatic habitats. This suggests that Hymenobacter perfusus may play a role in nutrient cycling and the degradation of organic materials within these ecosystems. The Gram-negative nature of this bacterium also indicates that it possesses an outer membrane, which could provide advantages in specific environmental conditions, such as resistance to certain antibiotics or environmental stresses. Overall, Hymenobacter perfusus str. LMG 26000 contributes to our understanding of microbial diversity and function in natural environments. Its characteristics may provide insights into the ecological roles of Gram-negative bacteria in soil and water systems, emphasizing their importance in maintaining ecological balance and contributing to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter perfusus
StrainLMG 26000

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter perfusus strain LMG 26000

Gene Summary

Adenine Count

1016850 bp

Thymine Count

1014209 bp

Guanine Count

1540436 bp

Cytosine Count

1541877 bp

Genome Length

5114284 bp

Protein-coding Genes

4305 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4292 domain-containing proteinEI293_03205Not AvailablePositive737821 - 73857928001.7
peptidase m23EI293_03210Not AvailablePositive738563 - 73991249846.5
gaf domain-containing proteinEI293_03215Not AvailableNegative740189 - 74114535768.2
twin-arginine translocase tata/tate family subunitEI293_03220Not AvailablePositive741469 - 7416938183.1
twin-arginine translocase tata/tate family subunitEI293_03225Not AvailablePositive741706 - 74208613872.8
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataEI293_03230Not AvailablePositive742098 - 74353752165.8
lysm peptidoglycan-binding domain-containing proteinEI293_03235Not AvailablePositive743753 - 74570572369.3
nadp-dependent malic enzymeEI293_03240Not AvailablePositive745879 - 74815282313.8
holliday junction branch migration protein ruvaEI293_03245Not AvailablePositive748388 - 74899321891.7
cell surface protein spraEI293_03250Not AvailablePositive749195 - 756625278459.0

Displaying genes 641 – 650 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.