Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EI293_02905 | Not Available | Negative | 656348 - 657745 | 53625.6 |
| nad-dependent epimerase/dehydratase family protein | EI293_02910 | Not Available | Negative | 657970 - 658962 | 36315.6 |
| capsular biosynthesis protein | EI293_02915 | Not Available | Negative | 658994 - 659752 | 27892.6 |
| polysaccharide biosynthesis tyrosine autokinase | EI293_02920 | Not Available | Negative | 659771 - 662221 | 90743.4 |
| polysaccharide export protein epse | EI293_02925 | Not Available | Negative | 662268 - 663206 | 33767.7 |
| acyl-coa dehydrogenase | EI293_02930 | Not Available | Positive | 663459 - 664598 | 41232.3 |
| 30s ribosomal protein s21 | EI293_02935 | Not Available | Positive | 664759 - 664959 | 7841.69 |
| integrase | EI293_02940 | Not Available | Positive | 665117 - 666004 | 33773.8 |
| ribosome-associated translation inhibitor raia | EI293_02945 | Not Available | Positive | 666040 - 666339 | 11330.5 |
| methionine adenosyltransferase | EI293_02950 | Not Available | Negative | 666412 - 667674 | 45805.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
