Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hipa family toxin | EI293_20545 | Not Available | Positive | 4791559 - 4792836 | 47479.2 |
| diaminopimelate decarboxylase | EI293_20550 | Not Available | Negative | 4793016 - 4794200 | 42701.3 |
| radical sam protein | EI293_20555 | Not Available | Negative | 4794193 - 4796262 | 75844.2 |
| radical sam protein | EI293_20560 | Not Available | Negative | 4796274 - 4797527 | 46248.9 |
| pqqd family protein | EI293_20565 | Not Available | Negative | 4797551 - 4798012 | 17704.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | EI293_20570 | Not Available | Negative | 4797909 - 4798937 | 38294.7 |
| hypothetical protein | EI293_20575 | Not Available | Negative | 4799002 - 4799565 | 21015.8 |
| hypothetical protein | EI293_20580 | Not Available | Negative | 4800349 - 4802172 | 66263.3 |
| hypothetical protein | EI293_20585 | Not Available | Negative | 4802591 - 4804879 | 82609.2 |
| transcriptional regulator | EI293_20590 | Not Available | Positive | 4805768 - 4805995 | 8432.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
