Hymenobacter perfusus str. LMG 26000

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter perfusus str. LMG 26000 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is an important aspect of its genetic organization. The genomic information for this strain is cataloged under the accession number RWIU00000000.1. In terms of ecological significance, members of the Hymenobacter genus are often found in various environmental niches, particularly in soil and aquatic habitats. This suggests that Hymenobacter perfusus may play a role in nutrient cycling and the degradation of organic materials within these ecosystems. The Gram-negative nature of this bacterium also indicates that it possesses an outer membrane, which could provide advantages in specific environmental conditions, such as resistance to certain antibiotics or environmental stresses. Overall, Hymenobacter perfusus str. LMG 26000 contributes to our understanding of microbial diversity and function in natural environments. Its characteristics may provide insights into the ecological roles of Gram-negative bacteria in soil and water systems, emphasizing their importance in maintaining ecological balance and contributing to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter perfusus
StrainLMG 26000

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter perfusus strain LMG 26000

Gene Summary

Adenine Count

1016850 bp

Thymine Count

1014209 bp

Guanine Count

1540436 bp

Cytosine Count

1541877 bp

Genome Length

5114284 bp

Protein-coding Genes

4305 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system hipa family toxinEI293_20545Not AvailablePositive4791559 - 479283647479.2
diaminopimelate decarboxylaseEI293_20550Not AvailableNegative4793016 - 479420042701.3
radical sam proteinEI293_20555Not AvailableNegative4794193 - 479626275844.2
radical sam proteinEI293_20560Not AvailableNegative4796274 - 479752746248.9
pqqd family proteinEI293_20565Not AvailableNegative4797551 - 479801217704.4
s-adenosylmethionine:trna ribosyltransferase-isomeraseEI293_20570Not AvailableNegative4797909 - 479893738294.7
hypothetical proteinEI293_20575Not AvailableNegative4799002 - 479956521015.8
hypothetical proteinEI293_20580Not AvailableNegative4800349 - 480217266263.3
hypothetical proteinEI293_20585Not AvailableNegative4802591 - 480487982609.2
transcriptional regulatorEI293_20590Not AvailablePositive4805768 - 48059958432.4

Displaying genes 4071 – 4080 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.