Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EI293_18930 | Not Available | Positive | 4435543 - 4436214 | 25206.1 |
| ccmd family protein | EI293_18935 | Not Available | Positive | 4436258 - 4436443 | 6726.41 |
| cytochrome c maturation protein ccme | EI293_18940 | Not Available | Positive | 4436581 - 4437009 | 15699.0 |
| hypothetical protein | EI293_18945 | Not Available | Positive | 4437113 - 4437979 | 32045.6 |
| cytochrome c biogenesis protein | EI293_18950 | Not Available | Positive | 4438054 - 4440651 | 96767.1 |
| t9ss c-terminal target domain-containing protein | EI293_18955 | Not Available | Negative | 4440966 - 4443752 | 96308.6 |
| duf2520 domain-containing protein | EI293_18960 | Not Available | Positive | 4443934 - 4444770 | 29151.2 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EI293_18965 | Not Available | Positive | 4444835 - 4445164 | 11924.1 |
| fe-s assembly protein iscx | EI293_18970 | Not Available | Positive | 4445265 - 4445501 | 9476.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | EI293_18975 | Not Available | Positive | 4445580 - 4446083 | 18414.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
