Hymenobacter perfusus str. LMG 26000

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter perfusus str. LMG 26000 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is an important aspect of its genetic organization. The genomic information for this strain is cataloged under the accession number RWIU00000000.1. In terms of ecological significance, members of the Hymenobacter genus are often found in various environmental niches, particularly in soil and aquatic habitats. This suggests that Hymenobacter perfusus may play a role in nutrient cycling and the degradation of organic materials within these ecosystems. The Gram-negative nature of this bacterium also indicates that it possesses an outer membrane, which could provide advantages in specific environmental conditions, such as resistance to certain antibiotics or environmental stresses. Overall, Hymenobacter perfusus str. LMG 26000 contributes to our understanding of microbial diversity and function in natural environments. Its characteristics may provide insights into the ecological roles of Gram-negative bacteria in soil and water systems, emphasizing their importance in maintaining ecological balance and contributing to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter perfusus
StrainLMG 26000

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter perfusus strain LMG 26000

Gene Summary

Adenine Count

1016850 bp

Thymine Count

1014209 bp

Guanine Count

1540436 bp

Cytosine Count

1541877 bp

Genome Length

5114284 bp

Protein-coding Genes

4305 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m28 family peptidaseEI293_18480Not AvailableNegative4323722 - 432461833128.0
uma2 family endonucleaseEI293_18485Not AvailablePositive4324771 - 432536722223.6
hypothetical proteinEI293_18490Not AvailableNegative4325370 - 432608327487.0
alpha-2-macroglobulin family proteinEI293_18495Not AvailablePositive4326199 - 4331733201996.0
hypothetical proteinEI293_18500Not AvailablePositive4331894 - 433244220696.4
penicillin-binding protein 1cEI293_18505Not AvailablePositive4332584 - 433497788207.9
tolc family proteinEI293_18510Not AvailablePositive4335417 - 433677550912.8
efflux rnd transporter periplasmic adaptor subunitEI293_18515Not AvailablePositive4336946 - 433809141036.1
multidrug efflux rnd transporter permease subunitEI293_18520Not AvailablePositive4338302 - 4341529116385.0
swim zinc finger family proteinEI293_18525Not AvailablePositive4342036 - 434338248375.3

Displaying genes 3661 – 3670 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.