Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | EI293_16875 | Not Available | Positive | 3937673 - 3938218 | 20311.8 |
| pentapeptide repeat-containing protein | EI293_16880 | Not Available | Negative | 3938700 - 3939071 | 14070.4 |
| methylmalonyl-coa mutase | EI293_16885 | Not Available | Positive | 3939229 - 3942717 | 128739.0 |
| duf1837 domain-containing protein | EI293_16890 | Not Available | Positive | 3942829 - 3943626 | 30144.7 |
| dead/deah box helicase | EI293_16895 | Not Available | Positive | 3943616 - 3946081 | 95220.9 |
| mbl fold metallo-hydrolase | EI293_16900 | Not Available | Positive | 3946303 - 3947079 | 27494.2 |
| abc transporter atp-binding protein | EI293_16905 | Not Available | Positive | 3947464 - 3948099 | 23167.0 |
| hypothetical protein | EI293_16910 | Not Available | Positive | 3948096 - 3949217 | 41800.5 |
| hypothetical protein | EI293_16915 | Not Available | Positive | 3949313 - 3950266 | 34558.3 |
| peptidoglycan glycosyltransferase | EI293_16920 | Not Available | Positive | 3950446 - 3952263 | 66622.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
