Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate-dependent dioxygenase alkb | EI293_12835 | Not Available | Positive | 3017344 - 3017940 | 21823.6 |
| tonb-dependent receptor | EI293_12840 | Not Available | Negative | 3018013 - 3020781 | 100855.0 |
| tonb-dependent receptor | EI293_12845 | Not Available | Negative | 3021046 - 3023670 | 95945.5 |
| fad-dependent monooxygenase | EI293_12850 | Not Available | Positive | 3024304 - 3025683 | 51924.8 |
| dna-binding response regulator | EI293_12855 | Not Available | Positive | 3025999 - 3026739 | 27734.5 |
| pas domain s-box protein | EI293_12860 | Not Available | Negative | 3026819 - 3030445 | 134982.0 |
| hypothetical protein | EI293_12865 | Not Available | Negative | 3030555 - 3031184 | 21934.7 |
| hypothetical protein | EI293_12870 | Not Available | Negative | 3031251 - 3031460 | 7223.92 |
| rna polymerase sigma-54 factor | EI293_12875 | Not Available | Negative | 3031635 - 3033218 | 59983.1 |
| asparagine--trna ligase | EI293_12880 | Not Available | Positive | 3033506 - 3034909 | 53091.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
