Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | EI293_10950 | Not Available | Negative | 2560854 - 2561882 | 38126.9 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | EI293_10955 | Not Available | Positive | 2562200 - 2562970 | 26723.8 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EI293_10960 | Not Available | Positive | 2563085 - 2563915 | 30346.2 |
| tonb-dependent receptor | EI293_10965 | Not Available | Positive | 2563970 - 2567221 | 118495.0 |
| ragb/susd family nutrient uptake outer membrane protein | EI293_10970 | Not Available | Positive | 2567250 - 2569094 | 66699.7 |
| cupin domain-containing protein | EI293_10975 | Not Available | Positive | 2569157 - 2569465 | 11307.5 |
| pectate lyase | EI293_10985 | Not Available | Positive | 2570694 - 2571659 | 36010.8 |
| tagaturonate reductase | EI293_10990 | Not Available | Positive | 2571670 - 2573193 | 56028.6 |
| altronate dehydratase | EI293_10995 | Not Available | Positive | 2573309 - 2574964 | 58643.0 |
| glucuronate isomerase | EI293_11000 | Not Available | Positive | 2575203 - 2576633 | 54542.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
