Hymenobacter perfusus str. LMG 26000

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Hymenobacter perfusus str. LMG 26000 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is an important aspect of its genetic organization. The genomic information for this strain is cataloged under the accession number RWIU00000000.1. In terms of ecological significance, members of the Hymenobacter genus are often found in various environmental niches, particularly in soil and aquatic habitats. This suggests that Hymenobacter perfusus may play a role in nutrient cycling and the degradation of organic materials within these ecosystems. The Gram-negative nature of this bacterium also indicates that it possesses an outer membrane, which could provide advantages in specific environmental conditions, such as resistance to certain antibiotics or environmental stresses. Overall, Hymenobacter perfusus str. LMG 26000 contributes to our understanding of microbial diversity and function in natural environments. Its characteristics may provide insights into the ecological roles of Gram-negative bacteria in soil and water systems, emphasizing their importance in maintaining ecological balance and contributing to biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter perfusus
StrainLMG 26000

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter perfusus strain LMG 26000

Gene Summary

Adenine Count

1016850 bp

Thymine Count

1014209 bp

Guanine Count

1540436 bp

Cytosine Count

1541877 bp

Genome Length

5114284 bp

Protein-coding Genes

4305 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidaseEI293_10750Not AvailableNegative2499694 - 250155669459.8
duf2027 domain-containing proteinEI293_10755Not AvailableNegative2502154 - 250326940344.5
duf2279 domain-containing proteinEI293_10760Not AvailableNegative2503369 - 250426833674.4
t9ss c-terminal target domain-containing proteinEI293_10765Not AvailablePositive2504507 - 2507389105895.0
n-acetylglucosamine kinaseEI293_10770Not AvailableNegative2507491 - 250833931676.2
t9ss c-terminal target domain-containing proteinEI293_10775Not AvailablePositive2508647 - 250973837746.6
susf/suse family outer membrane proteinEI293_10780Not AvailableNegative2509853 - 251089636854.1
ragb/susd family nutrient uptake outer membrane proteinEI293_10785Not AvailableNegative2510983 - 251265061343.7
susc/raga family tonb-linked outer membrane proteinEI293_10790Not AvailableNegative2512662 - 2515664107987.0
t9ss c-terminal target domain-containing proteinEI293_10795Not AvailablePositive2516613 - 251803451789.3

Displaying genes 2131 – 2140 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.