Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd family deoxyribonuclease | EI293_10545 | Not Available | Positive | 2454172 - 2454954 | 29087.8 |
| type i asparaginase | EI293_10550 | Not Available | Positive | 2455119 - 2456102 | 36252.7 |
| Trna-ser | Not Available | Not Available | Positive | 2456184 - 2456274 | Not Available |
| ribd family protein | EI293_10560 | Not Available | Positive | 2456379 - 2457080 | 26020.9 |
| enoyl-coa hydratase/isomerase family protein | EI293_10565 | Not Available | Negative | 2457207 - 2457968 | 26882.1 |
| phenylacetic acid degradation bifunctional protein paaz | EI293_10570 | Not Available | Negative | 2458156 - 2460207 | 73989.0 |
| 3-oxoadipyl-coa thiolase | EI293_10575 | Not Available | Negative | 2460601 - 2461806 | 42257.7 |
| hydroxyphenylacetyl-coa thioesterase paai | EI293_10580 | Not Available | Negative | 2461949 - 2462386 | 15840.9 |
| 3-hydroxybutyryl-coa dehydrogenase | EI293_10585 | Not Available | Negative | 2462367 - 2463542 | 42850.6 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | EI293_10590 | Not Available | Negative | 2463697 - 2464476 | 27875.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
