Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | EI293_00695 | Not Available | Negative | 169025 - 171481 | 91340.6 |
| ompa family protein | EI293_00700 | Not Available | Positive | 171940 - 174009 | 78710.2 |
| hypothetical protein | EI293_00705 | Not Available | Negative | 174246 - 174749 | 19203.6 |
| rip metalloprotease rsep | EI293_00710 | Not Available | Negative | 174905 - 176248 | 49432.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EI293_00715 | Not Available | Negative | 176447 - 177622 | 42454.0 |
| hypothetical protein | EI293_00720 | Not Available | Positive | 177782 - 178261 | 18180.7 |
| 3-oxoacyl-acp synthase | EI293_00725 | Not Available | Negative | 178361 - 178807 | 15740.8 |
| endonuclease/exonuclease/phosphatase family protein | EI293_00730 | Not Available | Negative | 178851 - 179696 | 32126.5 |
| hypothetical protein | EI293_00740 | Not Available | Negative | 180210 - 180623 | 15660.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 181820 - 182292 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
