Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EI293_00645 | Not Available | Positive | 151975 - 152523 | 20762.3 |
| branched-chain amino acid aminotransferase | EI293_00650 | Not Available | Positive | 152691 - 153761 | 39458.9 |
| peptide chain release factor 2 | EI293_00655 | Not Available | Positive | 153921 - 154998 | 40726.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EI293_00660 | Not Available | Negative | 155119 - 156735 | 59003.4 |
| susc/raga family tonb-linked outer membrane protein | EI293_00665 | Not Available | Negative | 156810 - 159956 | 113353.0 |
| tonb-dependent receptor | EI293_00670 | Not Available | Positive | 160720 - 163911 | 114352.0 |
| ragb/susd family nutrient uptake outer membrane protein | EI293_00675 | Not Available | Positive | 163932 - 165374 | 52170.4 |
| sdr family nad(p)-dependent oxidoreductase | EI293_00680 | Not Available | Negative | 165428 - 166159 | 26659.9 |
| atp-dependent protease atpase subunit hslu | EI293_00685 | Not Available | Negative | 166265 - 167680 | 52316.3 |
| type ix secretion system protein porq | EI293_00690 | Not Available | Negative | 167773 - 168828 | 37830.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
