Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter perfusus |
| Strain | LMG 26000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1016850 bp
Thymine Count
1014209 bp
Guanine Count
1540436 bp
Cytosine Count
1541877 bp
Genome Length
5114284 bp
Protein-coding Genes
4305 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf721 domain-containing protein | EI293_05895 | Not Available | Negative | 1392988 - 1393311 | 12092.0 |
| dna replication/repair protein recf | EI293_05900 | Not Available | Negative | 1393375 - 1394487 | 42948.3 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | EI293_05905 | Not Available | Positive | 1394682 - 1395734 | 38717.9 |
| tetratricopeptide repeat protein | EI293_05910 | Not Available | Positive | 1395789 - 1396565 | 28208.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | EI293_05915 | Not Available | Positive | 1396724 - 1397200 | 17106.4 |
| trar/dksa family transcriptional regulator | EI293_05920 | Not Available | Positive | 1397479 - 1397862 | 14192.9 |
| pseudouridine synthase | EI293_05925 | Not Available | Positive | 1398674 - 1399981 | 49810.1 |
| type iii pantothenate kinase | EI293_05930 | Not Available | Positive | 1400144 - 1400947 | 28045.0 |
| hypothetical protein | EI293_05935 | Not Available | Positive | 1400934 - 1402286 | 48347.8 |
| lps export abc transporter periplasmic protein lptc | EI293_05940 | Not Available | Positive | 1402297 - 1402884 | 21569.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
