Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantothenate synthetase | C800_00862 | Not Available | Positive | 977093 - 977941 | 31339.6 |
| aspartate 1-decarboxylase | C800_00863 | Not Available | Positive | 977963 - 978313 | 12822.7 |
| fructose-1,6-bisphosphatase class 3 | C800_00864 | Not Available | Negative | 978443 - 980443 | 76532.4 |
| aspt/yide/ybjl antiporter duplication domain-containing protein | C800_00865 | Not Available | Negative | 980453 - 982114 | 59396.0 |
| nad+ diphosphatase | C800_00866 | Not Available | Negative | 982191 - 982988 | 30147.3 |
| competence protein comea helix-hairpin-helix repeat region | C800_00867 | Not Available | Negative | 983011 - 985140 | 79596.4 |
| rna polymerase sigma-70 factor, expansion family 1 | C800_00868 | Not Available | Positive | 985320 - 985886 | 22011.8 |
| hypothetical protein | C800_00869 | Not Available | Positive | 985951 - 986901 | 36532.7 |
| hypothetical protein | C800_00870 | Not Available | Positive | 986898 - 989492 | 98799.7 |
| hypothetical protein | C800_00871 | Not Available | Positive | 989509 - 990231 | 28269.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

