Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthetase | C800_00852 | Not Available | Positive | 964765 - 966069 | 50064.5 |
| hypothetical protein | C800_00853 | Not Available | Negative | 966208 - 967908 | 62588.2 |
| rna methyltransferase, trmh family, group 3 | C800_00854 | Not Available | Negative | 967945 - 968712 | 28167.3 |
| dna repair protein recn | C800_00855 | Not Available | Negative | 968763 - 970424 | 62006.0 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase | C800_00856 | Not Available | Negative | 970540 - 971736 | 43166.3 |
| dna polymerase iii subunit epsilon | C800_00857 | Not Available | Negative | 971733 - 972509 | 29605.2 |
| dna polymerase iii, beta subunit | C800_00858 | Not Available | Negative | 972561 - 973685 | 41323.5 |
| hypothetical protein | C800_00859 | Not Available | Positive | 973839 - 974216 | 13929.4 |
| hypothetical protein | C800_00860 | Not Available | Negative | 974466 - 975896 | 53536.1 |
| starch synthase | C800_00861 | Not Available | Negative | 975916 - 976740 | 31933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

