Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate uptake (dcu) family transporter | C800_00822 | Not Available | Positive | 932987 - 934285 | 45850.3 |
| l-asparaginase, type ii | C800_00823 | Not Available | Positive | 934453 - 935511 | 37871.9 |
| hypothetical protein | C800_00824 | Not Available | Positive | 935599 - 936768 | 45056.2 |
| hypothetical protein | C800_00825 | Not Available | Negative | 936973 - 938151 | 42069.5 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | C800_00826 | Not Available | Positive | 938236 - 939672 | 53142.1 |
| glucose-6-phosphate dehydrogenase | C800_00827 | Not Available | Positive | 939721 - 941229 | 58278.9 |
| 6-phosphogluconolactonase | C800_00828 | Not Available | Positive | 941291 - 941995 | 26417.3 |
| cytochrome d ubiquinol oxidase, subunit ii | C800_00829 | Not Available | Negative | 942291 - 943436 | 42798.5 |
| cytochrome d ubiquinol oxidase subunit i | C800_00830 | Not Available | Negative | 943591 - 945093 | 55113.9 |
| hypothetical protein | C800_00831 | Not Available | Negative | 945117 - 945335 | 8685.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

