Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase do | C800_00772 | Not Available | Positive | 872136 - 873659 | 53839.6 |
| sigma-70 family rna polymerase sigma factor | C800_00773 | Not Available | Positive | 873899 - 874759 | 32805.3 |
| hypothetical protein | C800_00774 | Not Available | Positive | 874981 - 875376 | 15199.7 |
| hypothetical protein | C800_00775 | Not Available | Positive | 875387 - 876649 | 46815.5 |
| hypothetical protein | C800_00776 | Not Available | Negative | 876633 - 877031 | 15058.6 |
| metal ion (mn2+/fe2+) transporter (nramp) family metal ion transporter | C800_00777 | Not Available | Positive | 877134 - 878387 | 45790.1 |
| cell volume regulation protein a | C800_00778 | Not Available | Negative | 878464 - 879912 | 52867.7 |
| mate efflux family protein | C800_00779 | Not Available | Negative | 879909 - 881261 | 49414.7 |
| had hydrolase, family ia | C800_00780 | Not Available | Positive | 881351 - 882001 | 24626.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | C800_00781 | Not Available | Positive | 882054 - 882875 | 29580.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

