Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | C800_00612 | Not Available | Negative | 697587 - 698450 | 32438.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | C800_00613 | Not Available | Negative | 698457 - 699026 | 21947.1 |
| glucose-1-phosphate thymidylyltransferase | C800_00614 | Not Available | Negative | 699023 - 699913 | 33085.2 |
| hypothetical protein | C800_00615 | Not Available | Negative | 700429 - 700914 | 19033.9 |
| hypothetical protein | C800_00616 | Not Available | Negative | 700911 - 701201 | 10799.2 |
| hypothetical protein | C800_00617 | Not Available | Negative | 701269 - 701769 | 18946.6 |
| hypothetical protein | C800_00618 | Not Available | Positive | 702047 - 702244 | 7987.94 |
| hypothetical protein | C800_00619 | Not Available | Positive | 702443 - 704821 | 89960.3 |
| hypothetical protein | C800_00620 | Not Available | Negative | 704972 - 705202 | 8949.8 |
| hypothetical protein | C800_00621 | Not Available | Positive | 705451 - 705879 | 15564.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

