Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 639135 - 639220 | Not Available |
| 6,7-dimethyl-8-ribityllumazine synthase | C800_00563 | Not Available | Negative | 639332 - 639838 | 18128.7 |
| hypothetical protein | C800_00564 | Not Available | Negative | 639931 - 640608 | 24504.2 |
| dna replication and repair protein recf | C800_00565 | Not Available | Positive | 640761 - 641876 | 42967.7 |
| hypothetical protein | C800_00566 | Not Available | Positive | 641873 - 642163 | 11221.9 |
| 5-formyltetrahydrofolate cyclo-ligase | C800_00567 | Not Available | Negative | 642329 - 642790 | 17837.3 |
| c-terminal processing peptidase | C800_00568 | Not Available | Negative | 642783 - 644531 | 64897.7 |
| dcmp deaminase | C800_00569 | Not Available | Negative | 644546 - 644980 | 16211.4 |
| hypothetical protein | C800_00570 | Not Available | Negative | 644985 - 645479 | 18544.7 |
| peptidyl-dipeptidase dcp | C800_00571 | Not Available | Negative | 645493 - 647535 | 77809.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

