Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C800_00482 | Not Available | Negative | 551058 - 551993 | 35912.3 |
| shikimate 5-dehydrogenase | C800_00483 | Not Available | Negative | 552016 - 552756 | 27732.7 |
| menaquinone biosynthesis methyltransferase ubie | C800_00484 | Not Available | Negative | 552775 - 553512 | 27936.8 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | C800_00485 | Not Available | Negative | 553605 - 554549 | 35902.1 |
| hypothetical protein | C800_00486 | Not Available | Negative | 554570 - 555574 | 37733.4 |
| hypothetical protein | C800_00487 | Not Available | Positive | 555732 - 556406 | 24792.2 |
| trna pseudouridine synthase a | C800_00488 | Not Available | Positive | 556411 - 557214 | 30885.8 |
| hypothetical protein | C800_00489 | Not Available | Negative | 557180 - 557947 | 30524.9 |
| hypothetical protein | C800_00490 | Not Available | Negative | 557944 - 559212 | 48564.8 |
| hypothetical protein | C800_00491 | Not Available | Positive | 559569 - 560909 | 51223.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

