Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| v-type h+-transporting atpase subunit a | C800_04301 | Not Available | Negative | 5080846 - 5082600 | 65817.4 |
| hypothetical protein | C800_04302 | Not Available | Negative | 5082619 - 5083455 | 32594.0 |
| v-type h+-transporting atpase subunit e | C800_04303 | Not Available | Negative | 5083465 - 5084055 | 21755.7 |
| hypothetical protein | C800_04306 | Not Available | Positive | 5087377 - 5087520 | 5564.94 |
| hypothetical protein | C800_04307 | Not Available | Negative | 5087643 - 5089139 | 56804.6 |
| susc/raga family tonb-linked outer membrane protein | C800_04308 | Not Available | Negative | 5089152 - 5092280 | 115149.0 |
| hypothetical protein | C800_04309 | Not Available | Positive | 5092648 - 5093808 | 44957.8 |
| susc/raga family tonb-linked outer membrane protein | C800_04310 | Not Available | Positive | 5094420 - 5097359 | 109099.0 |
| hypothetical protein | C800_04311 | Not Available | Positive | 5097384 - 5098925 | 57184.2 |
| hypothetical protein | C800_04312 | Not Available | Positive | 5098950 - 5099738 | 28499.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

