Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system permease | C800_04291 | Not Available | Negative | 5066012 - 5066809 | 29545.9 |
| spermidine/putrescine import atp-binding protein pota | C800_04292 | Not Available | Negative | 5066822 - 5068210 | 51902.3 |
| hypothetical protein | C800_04293 | Not Available | Positive | 5068712 - 5069830 | 41334.4 |
| hypothetical protein | C800_04294 | Not Available | Positive | 5069977 - 5071590 | 63695.8 |
| alpha-glucan phosphorylase | C800_04295 | Not Available | Negative | 5071871 - 5074435 | 98180.8 |
| hypothetical protein | C800_04296 | Not Available | Negative | 5074464 - 5076134 | 63540.8 |
| v-type h+-transporting atpase subunit k | C800_04297 | Not Available | Negative | 5076388 - 5076852 | 15421.2 |
| v-type h+-transporting atpase subunit i | C800_04298 | Not Available | Negative | 5077066 - 5078871 | 67265.4 |
| v-type h+-transporting atpase subunit d | C800_04299 | Not Available | Negative | 5078868 - 5079473 | 23447.8 |
| v-type h+-transporting atpase subunit b | C800_04300 | Not Available | Negative | 5079488 - 5080810 | 48182.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

