Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | dnLKV7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1478248 bp
Thymine Count
1465647 bp
Guanine Count
1081650 bp
Cytosine Count
1086149 bp
Genome Length
5111694 bp
Protein-coding Genes
4244 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | C800_00412 | Not Available | Negative | 478686 - 482039 | 125097.0 |
| hypothetical protein | C800_00413 | Not Available | Negative | 482055 - 483224 | 44543.6 |
| rna polymerase sigma-70 factor, expansion family 1 | C800_00414 | Not Available | Negative | 483328 - 483879 | 21576.8 |
| dna mismatch repair protein muts2 | C800_00415 | Not Available | Negative | 483959 - 486463 | 95034.5 |
| Trna-ser | Not Available | Not Available | Positive | 486610 - 486694 | Not Available |
| hypothetical protein | C800_00417 | Not Available | Negative | 486813 - 487796 | 37569.8 |
| hypothetical protein | C800_00418 | Not Available | Negative | 487762 - 488208 | 17082.1 |
| hypothetical protein | C800_00419 | Not Available | Negative | 488766 - 489209 | 16664.8 |
| hypothetical protein | C800_00420 | Not Available | Negative | 489378 - 489677 | 11836.5 |
| hypothetical protein | C800_00421 | Not Available | Positive | 490342 - 490905 | 22255.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

